Transcript: lnc-KRTDAP-1:6

Basic information

LNCipedia transcript ID: lnc-KRTDAP-1:6 
LNCipedia gene ID: lnc-KRTDAP-1
Location (hg38): chr19:35432626-35436530
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3245 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232680.2|FTMT27300015442.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.096 non-coding 
CPAT coding probability 44.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRTDAP-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRTDAP-1:6
5.0 lnc-KRTDAP-1:6
5.1 lnc-SCGB2B2-41:2
5.2 lnc-KRTDAP-1:6