Transcript: lnc-LAMA1-3:8

Basic information

LNCipedia transcript ID: lnc-LAMA1-3:8 
LNCipedia gene ID: lnc-LAMA1-3
RefSeq ID: NR_134645
Location (hg38): chr18:6728927-6729862
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 385 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134645.1
Alternative gene names: LOC101927168


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -229.5447 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LAMA1-3:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMAD2-330:8
5.1 lnc-SMAD2-330:8
5.2 lnc-LAMA1-3:8