Transcript: lnc-LAMB3-1:5

Basic information

LNCipedia transcript ID: lnc-LAMB3-1:5 
LNCipedia gene ID: lnc-LAMB3-1
Location (hg38): chr1:209661225-209742603
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 716 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227591.1|ENCT00000037288.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.4396 non-coding 
CPAT coding probability 3.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LAMB3-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LAMB3-1:5
5.0 lnc-LAMB3-1:5
5.1 lnc-IRF6-1:2
5.2 lnc-LAMB3-1:5