Transcript: lnc-LAMC2-1:1

Basic information

LNCipedia transcript ID: lnc-LAMC2-1:1 
LNCipedia gene ID: lnc-LAMC2-1
Location (hg38): chr1:183138379-183141304
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 524 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000457852.1; RP11-181K3.4-001; OTTHUMT00000106400.1; NONHSAT008349
Alternative gene names: ENSG00000224468.1; RP11-181K3.4; OTTHUMG00000046152.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.5881 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LAMC2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LAMC2-1:1
4.0 lnc-LAMC2-1:1
4.1 lnc-LAMC2-1:1
5.0 lnc-LAMC2-1:1
5.1 lnc-C1orf21-30:1
5.2 lnc-LAMC2-1:1