Transcript: lnc-LASP1-5:1

Basic information

LNCipedia transcript ID: lnc-LASP1-5:1 
LNCipedia gene ID: lnc-LASP1-5
Location (hg38): chr17:38925309-38929382
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 3104 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025371; NONHSAT053388
Alternative gene names: XLOC_012187; linc-RPL19-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.9054 non-coding 
CPAT coding probability 2.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LASP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LASP1-1:2
3.1 lnc-LASP1-1:2
4.0 LINC00672:3
4.1 LINC00672:3
5.0 LINC00672:3
5.1 lnc-RPL19-9:3
5.2 lnc-LASP1-5:1