Transcript: lnc-LBR-1:5

Basic information

LNCipedia transcript ID: lnc-LBR-1:5 
LNCipedia gene ID: lnc-LBR-1
Location (hg38): chr1:225447991-225465344
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 717 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234476.1|ENST00000433058.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -108.0684 non-coding 
CPAT coding probability 5.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LBR-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LBR-1:5
5.0 lnc-LBR-1:5
5.1 lnc-LEFTY2-16:3
5.2 lnc-LBR-1:5