Transcript: lnc-LCN2-1:3

Basic information

LNCipedia transcript ID: lnc-LCN2-1:3 
LNCipedia gene ID: lnc-LCN2-1
RefSeq ID: NR_024425
Location (hg38): chr9:128128529-128130634
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2106 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT134905; NR_024425; NR_024425.1
Alternative gene names: PTGES2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.818 non-coding 
CPAT coding probability 74.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LCN2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL590708.2-1:1
4.0 lnc-AL590708.2-1:1
4.1 lnc-AL590708.2-1:1
5.0 lnc-AL590708.2-1:1
5.1 lnc-PTPA-68:1
5.2 lnc-LCN2-1:3