Transcript: lnc-LECT2-1:1

Basic information

LNCipedia transcript ID: lnc-LECT2-1:1 
LNCipedia gene ID: lnc-LECT2-1
Location (hg38): chr5:135908173-135922307
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 278 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010494; NONHSAT103939
Alternative gene names: XLOC_005013; linc-IL9-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.6609 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LECT2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LECT2-1:1
3.1 lnc-LECT2-1:1
4.0 lnc-LECT2-1:1
4.1 lnc-LECT2-1:1
5.0 lnc-LECT2-1:1
5.1 lnc-TIFAB-12:1
5.2 lnc-LECT2-1:1