Transcript: lnc-LEF1-3:17

Basic information

LNCipedia transcript ID: lnc-LEF1-3:17 
LNCipedia gene ID: lnc-LEF1-3
Location (hg38): chr4:107886746-107978923
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 524 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245293.2|FTMT21300040975.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.6723 non-coding 
CPAT coding probability 12.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEF1-3:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LEF1-3:17
5.0 lnc-LEF1-3:17
5.1 lnc-TIFA-33:9
5.2 lnc-LEF1-3:17