Transcript: lnc-LEKR1-42:1

Basic information

LNCipedia transcript ID: lnc-LEKR1-42:1 
LNCipedia gene ID: lnc-LEKR1-42
Location (hg38): chr3:157137973-157142865
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4233 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT092888; FPKM1_group_22272_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8469 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEKR1-42:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LEKR1-5:1
4.0 lnc-LEKR1-5:1
4.1 lnc-LEKR1-5:1
5.0 lnc-LEKR1-5:1
5.1 lnc-LEKR1-8:1
5.2 lnc-LEKR1-42:1