Transcript: lnc-LENG9-5:1

Basic information

LNCipedia transcript ID: lnc-LENG9-5:1 
LNCipedia gene ID: lnc-LENG9-5
Ensembl Gene ID: ENSG00000267838
Ensembl Transcript ID: ENST00000599382
Location (hg38): chr19:54438665-54439544
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 880 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000599382.2
Alternative gene names: ENSG00000267838.2; AC008746.12; ; AC245884.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -165.0301 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LENG9-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LENG8-AS1:10
4.1 LENG8-AS1:10
5.0 LENG8-AS1:10
5.1 lnc-TMC4-22:1
5.2 lnc-LENG9-5:1