Transcript: lnc-LENG9-7:1

Basic information

LNCipedia transcript ID: lnc-LENG9-7:1 
LNCipedia gene ID: lnc-LENG9-7
Ensembl Gene ID: ENSG00000227407
Ensembl Transcript ID: ENST00000457113
Location (hg38): chr19:54430654-54434698
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 529 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457113.1; AC008746.3-001; OTTHUMT00000140522.1; NONHSAT067913
Alternative gene names: ENSG00000227407.1; AC008746.3; OTTHUMG00000065547.1; ; AC245884.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LENG9-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LENG9-2:1
4.0 lnc-LENG9-2:1
4.1 LENG8-AS1:25
5.0 LENG8-AS1:25
5.1 lnc-TMC4-20:1
5.2 lnc-LENG9-7:1