Transcript: lnc-LEXM-2:3

Basic information

LNCipedia transcript ID: lnc-LEXM-2:3 
LNCipedia gene ID: lnc-LEXM-2
Location (hg38): chr1:54887399-54888850
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 844 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233203.2|ENST00000455380.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.3286 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEXM-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf177-2:13
5.0 lnc-C1orf177-2:13
5.1 lnc-MROH7-TTC4-6:6
5.2 lnc-LEXM-2:3