Transcript: lnc-LEXM-2:5

Basic information

LNCipedia transcript ID: lnc-LEXM-2:5 
LNCipedia gene ID: lnc-LEXM-2
Location (hg38): chr1:54887399-54889719
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2321 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233203.2|MICT00000011516.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.5403 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEXM-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf177-2:12
5.0 lnc-C1orf177-2:12
5.1 lnc-MROH7-TTC4-6:8
5.2 lnc-LEXM-2:5