Transcript: lnc-LGALS9-1:2

Basic information

LNCipedia transcript ID: lnc-LGALS9-1:2 
LNCipedia gene ID: lnc-LGALS9-1
Location (hg38): chr17:27623535-27626435
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2901 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT052328; NONHSAT052329
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3161 non-coding 
CPAT coding probability 67.84% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LGALS9-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KSR1-1:1
4.0 lnc-KSR1-1:1
4.1 lnc-KSR1-1:1
5.0 lnc-KSR1-1:1
5.1 lnc-PIPOX-57:1
5.2 lnc-LGALS9-1:2