Transcript: lnc-LGALSL-2:8

Basic information

LNCipedia transcript ID: lnc-LGALSL-2:8 
LNCipedia gene ID: lnc-LGALSL-2
Location (hg38): chr2:64228203-64229647
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 525 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT071099; FPKM1_group_16262_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.9255 non-coding 
CPAT coding probability 2.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALSL-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LGALSL-2:8
4.0 lnc-LGALSL-2:8
4.1 lnc-LGALSL-2:8
5.0 lnc-LGALSL-2:8
5.1 lnc-AFTPH-15:5
5.2 lnc-LGALSL-2:8