Transcript: lnc-LHFPL5-1:3

Basic information

LNCipedia transcript ID: lnc-LHFPL5-1:3 
LNCipedia gene ID: lnc-LHFPL5-1
Location (hg38): chr6:35921203-35934320
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13118 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083724.1|ENCT00000371846.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 93.2239 coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LHFPL5-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LHFPL5-1:3
5.0 lnc-LHFPL5-1:3
5.1 lnc-PI16-35:3
5.2 lnc-LHFPL5-1:3