Transcript: lnc-LHX4-1:2

Basic information

LNCipedia transcript ID: lnc-LHX4-1:2 
LNCipedia gene ID: lnc-LHX4-1
RefSeq ID: NR_026900
Location (hg38): chr1:180198009-180200725
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2717 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026900.1
Alternative gene names: FLJ23867


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.6068 non-coding 
CPAT coding probability 9.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LHX4-1:2 yes no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CEP350-5:2
5.1 lnc-CEP350-5:2
5.2 lnc-LHX4-1:2