Transcript: lnc-LIG3-2:1

Basic information

LNCipedia transcript ID: lnc-LIG3-2:1 
LNCipedia gene ID: lnc-LIG3-2
Location (hg38): chr17:34979224-34979792
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT053041
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.7703 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIG3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIG3-1:1
4.0 lnc-LIG3-1:1
4.1 lnc-LIG3-1:1
5.0 lnc-LIG3-1:1
5.1 lnc-RPL19-92:1
5.2 lnc-LIG3-2:1