Transcript: lnc-LIG4-2:1

Basic information

LNCipedia transcript ID: lnc-LIG4-2:1 
LNCipedia gene ID: lnc-LIG4-2
Location (hg38): chr13:108834000-108854133
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1488 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_914_chr13:109486347-109496422_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.4828 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIG4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIG4-2:1
4.0 lnc-LIG4-2:1
4.1 lnc-LIG4-2:1
5.0 lnc-LIG4-2:1
5.1 lnc-IRS2-10:1
5.2 lnc-LIG4-2:1