Transcript: lnc-LIN28B-10:4

Basic information

LNCipedia transcript ID: lnc-LIN28B-10:4 
LNCipedia gene ID: lnc-LIN28B-10
Location (hg38): chr6:105403268-105482233
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4359 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000085185.1|ENCT00000375902.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.6013 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIN28B-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf112-2:4
5.0 lnc-C6orf112-2:4
5.1 lnc-SMPD2-63:4
5.2 lnc-LIN28B-10:4