Transcript: lnc-LIN28B-10:7

Basic information

LNCipedia transcript ID: lnc-LIN28B-10:7 
LNCipedia gene ID: lnc-LIN28B-10
Location (hg38): chr6:105453644-105479067
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000085185.1|FTMT22300014318.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.8592 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIN28B-10:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf112-2:7
5.0 lnc-C6orf112-2:7
5.1 lnc-SMPD2-63:7
5.2 lnc-LIN28B-10:7