Transcript: lnc-LINC00854-1:24

Basic information

LNCipedia transcript ID: lnc-LINC00854-1:24 
LNCipedia gene ID: lnc-LINC00854-1
Location (hg38): chr17:43221168-43303331
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1107 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT053833
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 128.4507 coding 
CPAT coding probability 87.27% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LINC00854-1:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRCA1-1:5
4.0 LINC00854:4
4.1 LINC00854:4
5.0 LINC00854:4
5.1 lnc-LINC00854-1:5
5.2 lnc-LINC00854-1:24