Transcript: lnc-LINC00854-1:28

Basic information

LNCipedia transcript ID: lnc-LINC00854-1:28 
LNCipedia gene ID: lnc-LINC00854-1
Location (hg38): chr17:43221168-43224576
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 902 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053834
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.5042 non-coding 
CPAT coding probability 63.52% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LINC00854-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BRCA1-1:8
4.0 LINC00854:8
4.1 LINC00854:8
5.0 LINC00854:8
5.1 lnc-LINC00854-1:10
5.2 lnc-LINC00854-1:28