Transcript: lnc-LINC02210-CRHR1-52:18

Basic information

LNCipedia transcript ID: lnc-LINC02210-CRHR1-52:18 
LNCipedia gene ID: lnc-LINC02210-CRHR1-52
RefSeq ID: NR_026906
Location (hg38): chr17:45638975-45646229
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 942 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT054171; NR_026906; NR_026906.2
Alternative gene names: FLJ25168; CRHR1-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.086 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINC02210-CRHR1-52:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf69-2:16
4.0 CRHR1-IT1:20
4.1 CRHR1-IT1:20
5.0 CRHR1-IT1:20
5.1 lnc-CCDC103-52:20
5.2 lnc-LINC02210-CRHR1-52:18