Transcript: lnc-LINC02210-CRHR1-52:25

Basic information

LNCipedia transcript ID: lnc-LINC02210-CRHR1-52:25 
LNCipedia gene ID: lnc-LINC02210-CRHR1-52
Location (hg38): chr17:45645671-45648216
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2546 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: NONHSAT054173; ENST00000589868.1
Alternative gene names: ENSG00000204650.13; CRHR1-IT1; FLJ25168


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.3325 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINC02210-CRHR1-52:25 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf69-2:18
4.0 CRHR1-IT1:26
4.1 CRHR1-IT1:26
5.0 CRHR1-IT1:26
5.1 lnc-CCDC103-52:27
5.2 lnc-LINC02210-CRHR1-52:25