Transcript: lnc-LLPH-23:2

Basic information

LNCipedia transcript ID: lnc-LLPH-23:2 
LNCipedia gene ID: lnc-LLPH-23
Location (hg38): chr12:65728231-65729556
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1224 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012291.1|MICT00000081478.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.2184 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LLPH-23:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-366L20.2.1-4:3
5.0 lnc-RP11-366L20.2.1-4:3
5.1 lnc-LLPH-11:2
5.2 lnc-LLPH-23:2