Transcript: lnc-LMBRD1-5:22

Basic information

LNCipedia transcript ID: lnc-LMBRD1-5:22 
LNCipedia gene ID: lnc-LMBRD1-5
Ensembl Gene ID: ENSG00000230910
Ensembl Transcript ID: ENST00000603261
Location (hg38): chr6:68629962-68634962
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 712 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000603261.1
Alternative gene names: ENSG00000230910.2; RP3-525N10.2; AL391807.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.9377 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMBRD1-5:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL713998.1-2:12
4.0 lnc-AL713998.1-2:12
4.1 lnc-AL713998.1-2:12
5.0 lnc-AL713998.1-2:12
5.1 lnc-CEP162-90:22
5.2 lnc-LMBRD1-5:22