Transcript: lnc-LMF1-1:2

Basic information

LNCipedia transcript ID: lnc-LMF1-1:2 
LNCipedia gene ID: lnc-LMF1-1
Location (hg38): chr16:991148-1000926
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 984 bp
Exons: 8
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000599946.1
Alternative gene names: ENSG00000260496.2; RP11-161M6.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.2533 non-coding 
CPAT coding probability 99.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LMF1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LMF1-1:2
4.0 lnc-LMF1-1:2
4.1 lnc-LMF1-1:2
5.0 lnc-LMF1-1:2
5.1 lnc-PKMYT1-105:1
5.2 lnc-LMF1-1:2