Transcript: lnc-LMF1-3:17

Basic information

LNCipedia transcript ID: lnc-LMF1-3:17 
LNCipedia gene ID: lnc-LMF1-3
Location (hg38): chr16:975759-981607
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2527 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260807.2|MICT00000124687.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -60.6102 non-coding 
CPAT coding probability 76.69% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LMF1-3:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LMF1-3:17
5.0 lnc-LMF1-3:17
5.1 lnc-PKMYT1-106:2
5.2 lnc-LMF1-3:17