Transcript: lnc-LMNB1-3:5

Basic information

LNCipedia transcript ID: lnc-LMNB1-3:5 
LNCipedia gene ID: lnc-LMNB1-3
Location (hg38): chr5:127030764-127036818
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2294 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000077434.1|MICT00000288486.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.2609 non-coding 
CPAT coding probability 7.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMNB1-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LMNB1-3:5
5.0 lnc-LMNB1-3:5
5.1 lnc-PDLIM4-112:5
5.2 lnc-LMNB1-3:5