Transcript: lnc-LMNTD1-1:3

Basic information

LNCipedia transcript ID: lnc-LMNTD1-1:3 
LNCipedia gene ID: lnc-LMNTD1-1
Location (hg38): chr12:25381015-25386199
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5179 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000011538.1|ENCT00000100005.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.0194 non-coding 
CPAT coding probability 4.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMNTD1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IFLTD1-1:3
5.0 lnc-IFLTD1-1:3
5.1 lnc-WBP11-79:3
5.2 lnc-LMNTD1-1:3