Transcript: lnc-LMNTD2-3:6

Basic information

LNCipedia transcript ID: lnc-LMNTD2-3:6 
LNCipedia gene ID: lnc-LMNTD2-3
Location (hg38): chr11:573759-574784
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1026 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1550:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.0774 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMNTD2-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C11orf35-3:4
4.1 lnc-C11orf35-3:4
5.0 lnc-C11orf35-3:4
5.1 lnc-OR52A1-95:6
5.2 lnc-LMNTD2-3:6