Transcript: lnc-LMO4-2:20

Basic information

LNCipedia transcript ID: lnc-LMO4-2:20 
LNCipedia gene ID: lnc-LMO4-2
Ensembl Gene ID: ENSG00000284240
Ensembl Transcript ID: ENST00000640491
Location (hg38): chr1:87212669-87251331
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1152 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000640491.1
Alternative gene names: ENSG00000284240.1; AC099062.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.7737 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMO4-2:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PKN2-9:5
5.1 lnc-PKN2-9:5
5.2 lnc-LMO4-2:20