Transcript: lnc-LMTK3-4:5

Basic information

LNCipedia transcript ID: lnc-LMTK3-4:5 
LNCipedia gene ID: lnc-LMTK3-4
Location (hg38): chr19:48463325-48470483
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4126 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268530.1|HBMT00000741272.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 107.2907 coding 
CPAT coding probability 77.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LMTK3-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LMTK3-4:5
5.0 lnc-LMTK3-4:5
5.1 lnc-TMEM143-4:1
5.2 lnc-LMTK3-4:5