Transcript: lnc-LNPEP-6:5

Basic information

LNCipedia transcript ID: lnc-LNPEP-6:5 
LNCipedia gene ID: lnc-LNPEP-6
Location (hg38): chr5:97183599-97437217
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 893 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000504578.1; RP11-155G15.2-001; OTTHUMT00000370138.2; NONHSAT102924
Alternative gene names: ENSG00000251513.1; RP11-155G15.2; OTTHUMG00000162702.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.7584 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LNPEP-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2215E18.1.1-1:1
4.0 lnc-CTD-2215E18.1.1-1:1
4.1 lnc-CTD-2215E18.1.1-1:1
5.0 lnc-CTD-2215E18.1.1-1:1
5.1 lnc-GPR150-126:5
5.2 lnc-LNPEP-6:5