Transcript: lnc-LONP2-4:1

Basic information

LNCipedia transcript ID: lnc-LONP2-4:1 
LNCipedia gene ID: lnc-LONP2-4
Location (hg38): chr16:48620240-48622230
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024384; NONHSAT142350
Alternative gene names: XLOC_011711; linc-C16orf78-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.5732 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONP2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LONP2-2:1
3.1 lnc-LONP2-4:1
4.0 lnc-LONP2-4:1
4.1 lnc-LONP2-4:1
5.0 lnc-LONP2-4:1
5.1 lnc-ADGRG1-168:1
5.2 lnc-LONP2-4:1