Transcript: lnc-LONRF1-10:1

Basic information

LNCipedia transcript ID: lnc-LONRF1-10:1 
LNCipedia gene ID: lnc-LONRF1-10
Location (hg38): chr8:13356882-13357444
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 563 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101691.1|ENCT00000432698.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -159.7288 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONRF1-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LONRF1-10:1
5.0 lnc-LONRF1-10:1
5.1 lnc-PINX1-71:1
5.2 lnc-LONRF1-10:1