Transcript: lnc-LONRF1-1:3

Basic information

LNCipedia transcript ID: lnc-LONRF1-1:3 
LNCipedia gene ID: lnc-LONRF1-1
Location (hg38): chr8:12766063-12811401
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 956 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00014511
Alternative gene names: XLOC_007009; linc-LONRF1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.6699 non-coding 
CPAT coding probability 26.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONRF1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LONRF1-1:2
3.1 lnc-LONRF1-1:3
4.0 lnc-LONRF1-1:3
4.1 lnc-LONRF1-1:3
5.0 lnc-LONRF1-1:3
5.1 lnc-PINX1-66:2
5.2 lnc-LONRF1-1:3