Transcript: lnc-LPCAT1-4:10

Basic information

LNCipedia transcript ID: lnc-LPCAT1-4:10 
LNCipedia gene ID: lnc-LPCAT1-4
Location (hg38): chr5:1628755-1634005
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1337 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT100064
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.5725 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LPCAT1-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LPCAT1-3:2
4.0 lnc-LPCAT1-3:2
4.1 lnc-LPCAT1-3:2
5.0 lnc-LPCAT1-3:2
5.1 lnc-IRX2-13:10
5.2 lnc-LPCAT1-4:10