Transcript: lnc-LPIN1-10:4

Basic information

LNCipedia transcript ID: lnc-LPIN1-10:4 
LNCipedia gene ID: lnc-LPIN1-10
Location (hg38): chr2:11924579-12495799
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2183 bp
Exons: 6
Sources: NONCODE v4; Nielsen et al.,2014
Alternative transcript names: NONHSAT069210; ucscGeneNc_uc002rbu_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.9034 non-coding 
CPAT coding probability 3.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LPIN1-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GREB1-10:4
4.0 lnc-LPIN1-10:4
4.1 lnc-LPIN1-10:4
5.0 lnc-LPIN1-10:4
5.1 lnc-SNX17-172:4
5.2 lnc-LPIN1-10:4