Transcript: lnc-LRFN3-59:2

Basic information

LNCipedia transcript ID: lnc-LRFN3-59:2 
LNCipedia gene ID: lnc-LRFN3-59
RefSeq ID: NR_136525
Location (hg38): chr19:35947115-35964070
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2426 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136525.1
Alternative gene names: LOC105372383


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.4334 non-coding 
CPAT coding probability 97.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRFN3-59:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GPR42-59:2
5.1 lnc-GPR42-59:2
5.2 lnc-LRFN3-59:2