Transcript: lnc-LRP11-1:6

Basic information

LNCipedia transcript ID: lnc-LRP11-1:6 
LNCipedia gene ID: lnc-LRP11-1
Ensembl Gene ID: ENSG00000231760
Ensembl Transcript ID: ENST00000455607
Location (hg38): chr6:149796151-149798172
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1541 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455607.3
Alternative gene names: ENSG00000231760.4; RP11-350J20.5; AL355312.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.221 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP11-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LRP11-1:6
4.1 lnc-LRP11-1:6
5.0 lnc-LRP11-1:6
5.1 lnc-RAET1G-7:6
5.2 lnc-LRP11-1:6