Transcript: lnc-LRP1B-1:1

Basic information

LNCipedia transcript ID: lnc-LRP1B-1:1 
LNCipedia gene ID: lnc-LRP1B-1
Ensembl Gene ID: ENSG00000244125
Ensembl Transcript ID: ENST00000436132
Location (hg38): chr2:142131178-142137830
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 416 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000436132.1; AC078882.1-001; OTTHUMT00000332126.1; NONHSAT074710
Alternative gene names: ENSG00000244125.1; AC078882.1; OTTHUMG00000153687.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.6408 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP1B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRP1B-1:1
4.0 lnc-LRP1B-1:1
4.1 lnc-LRP1B-1:1
5.0 lnc-LRP1B-1:1
5.1 lnc-MMADHC-121:1
5.2 lnc-LRP1B-1:1