Transcript: lnc-LRP5-1:3

Basic information

LNCipedia transcript ID: lnc-LRP5-1:3 
LNCipedia gene ID: lnc-LRP5-1
Location (hg38): chr11:68272529-68274518
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 251 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019940; NONHSAT022523
Alternative gene names: XLOC_009185; linc-LRP5-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.3652 non-coding 
CPAT coding probability 10.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP5-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRP5-1:3
3.1 lnc-LRP5-1:3
4.0 lnc-LRP5-1:3
4.1 lnc-LRP5-1:3
5.0 lnc-LRP5-1:3
5.1 lnc-TCIRG1-7:10
5.2 lnc-LRP5-1:3