Transcript: lnc-LRP5L-1:1

Basic information

LNCipedia transcript ID: lnc-LRP5L-1:1 
LNCipedia gene ID: lnc-LRP5L-1
Location (hg38): chr22:25281837-25283094
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 568 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000444383; ENST00000444383.1; RP3-462D8.2-003; OTTHUMT00000320494.1; NONHSAT147213
Alternative gene names: ENSG00000233577; RP3-462D8.2; ENSG00000233577.1; OTTHUMG00000150906.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.3793 non-coding 
CPAT coding probability 19.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP5L-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRP5L-1:1
3.1 lnc-LRP5L-1:1
4.0 lnc-LRP5L-1:1
4.1 lnc-LRP5L-1:1
5.0 lnc-LRP5L-1:1
5.1 lnc-PITPNB-62:1
5.2 lnc-LRP5L-1:1