Transcript: lnc-LRP5L-3:1

Basic information

LNCipedia transcript ID: lnc-LRP5L-3:1 
LNCipedia gene ID: lnc-LRP5L-3
Ensembl Gene ID: ENSG00000237387
Ensembl Transcript ID: ENST00000413494
Location (hg38): chr22:25580241-25581382
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 660 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413494.1; CTA-407F11.7-001; OTTHUMT00000320486.1; NONHSAT084439
Alternative gene names: ENSG00000237387.1; CTA-407F11.7; OTTHUMG00000150901.1; AL022329.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -269.6694 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP5L-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRP5L-3:1
4.0 lnc-LRP5L-3:1
4.1 lnc-LRP5L-3:1
5.0 lnc-LRP5L-3:1
5.1 lnc-PITPNB-53:1
5.2 lnc-LRP5L-3:1