Transcript: lnc-LRRC32-6:3

Basic information

LNCipedia transcript ID: lnc-LRRC32-6:3 
LNCipedia gene ID: lnc-LRRC32-6
Ensembl Gene ID: ENSG00000255100
Ensembl Transcript ID: ENST00000528075
RefSeq ID: NR_120562
Location (hg38): chr11:76782581-76783062
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 336 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000528075.1; RP11-21L23.3-001; OTTHUMT00000382872.1; NR_120562; NR_120562.1
Alternative gene names: ENSG00000255100.1; RP11-21L23.3; OTTHUMG00000165239.1; AP003119.2; LOC101928837


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.5315 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC32-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC32-6:3
4.0 lnc-LRRC32-6:3
4.1 lnc-LRRC32-6:3
5.0 lnc-LRRC32-6:3
5.1 lnc-WNT11-17:10
5.2 lnc-LRRC32-6:3