Transcript: lnc-LRRC32-6:5

Basic information

LNCipedia transcript ID: lnc-LRRC32-6:5 
LNCipedia gene ID: lnc-LRRC32-6
Ensembl Gene ID: ENSG00000255100
Ensembl Transcript ID: ENST00000526585
Location (hg38): chr11:76782630-76783059
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 296 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000526585.1; RP11-21L23.3-002; OTTHUMT00000382873.1
Alternative gene names: ENSG00000255100.1; RP11-21L23.3; OTTHUMG00000165239.1; AP003119.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.531 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC32-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC32-6:5
4.0 lnc-LRRC32-6:5
4.1 lnc-LRRC32-6:5
5.0 lnc-LRRC32-6:5
5.1 lnc-WNT11-17:13
5.2 lnc-LRRC32-6:5