Transcript: lnc-LRRC47-78:24

Basic information

LNCipedia transcript ID: lnc-LRRC47-78:24 
LNCipedia gene ID: lnc-LRRC47-78
Location (hg38): chr1:3737135-3746370
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3804 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227372.6|FTMT20100106625.1
Alternative gene names: PDAM


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 49.1649 non-coding 
CPAT coding probability 76.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRRC47-78:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TP73-AS1:34
5.0 TP73-AS1:34
5.1 lnc-CLSTN1-78:24
5.2 lnc-LRRC47-78:24